Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus histidinilytica
Accession NumberFUYM00000000.1
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase) | SAMN06295920_111152 | Not Available | - | 4427528 - 4428661 | 41604.8 |
| dna-binding transcriptional regulator, csgd family | SAMN06295920_111153 | Not Available | - | 4428954 - 4430105 | 41434.2 |
| glutaconate coa-transferase subunit a | SAMN06295920_111154 | Not Available | + | 4430278 - 4431162 | 31828.3 |
| glutaconate coa-transferase subunit b | SAMN06295920_111155 | Not Available | + | 4431165 - 4431959 | 29140.8 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN06295920_111156 | Not Available | - | 4432112 - 4433566 | 51180.0 |
| amidohydrolase | SAMN06295920_111157 | Not Available | - | 4433571 - 4434758 | 44710.5 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN06295920_111158 | Not Available | - | 4434859 - 4435638 | 26851.4 |
| enoyl-coa hydratase | SAMN06295920_111159 | Not Available | - | 4435638 - 4436453 | 29552.3 |
| acyl-coa dehydrogenase | SAMN06295920_111160 | Not Available | + | 4436582 - 4438657 | 73497.3 |
| 4-carboxymuconolactone decarboxylase | SAMN06295920_111161 | Not Available | - | 4438658 - 4438984 | 12012.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.