Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus histidinilytica
Accession NumberFUYM00000000.1
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN06295920_11078 | Not Available | + | 4113769 - 4114599 | 27882.7 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN06295920_11079 | Not Available | + | 4114620 - 4115363 | 27280.6 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN06295920_11080 | Not Available | + | 4115472 - 4116335 | 31014.9 |
| hydroxypyruvate isomerase | SAMN06295920_11081 | Not Available | + | 4116342 - 4117112 | 27153.3 |
| l-lactate dehydrogenase (cytochrome)/(s)-mandelate dehydrogenase | SAMN06295920_11082 | Not Available | + | 4117105 - 4118301 | 42102.4 |
| quinol monooxygenase ygin | SAMN06295920_11083 | Not Available | + | 4118298 - 4118588 | 11167.2 |
| glutathione s-transferase | SAMN06295920_11084 | Not Available | + | 4118599 - 4119207 | 22403.9 |
| 4-hydroxymandelate oxidase | SAMN06295920_11085 | Not Available | + | 4119220 - 4120278 | 37386.3 |
| isopenicillin n synthase | SAMN06295920_11086 | Not Available | - | 4120283 - 4121317 | 38959.4 |
| iron complex outermembrane recepter protein | SAMN06295920_11087 | Not Available | - | 4121319 - 4123460 | 78016.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.