Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus histidinilytica
Accession NumberFUYM00000000.1
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN06295920_109125 | Not Available | + | 3918389 - 3920665 | 80116.5 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN06295920_109126 | Not Available | + | 3920761 - 3922533 | 63258.6 |
| uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein family | SAMN06295920_109127 | Not Available | - | 3922607 - 3922873 | 9101.66 |
| hypothetical protein | SAMN06295920_109128 | Not Available | + | 3923048 - 3923293 | 9120.07 |
| Trna-tyr | Not Available | Not Available | + | 3923359 - 3923444 | Not Available |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN06295920_109130 | Not Available | + | 3923570 - 3924313 | 26484.7 |
| ferredoxin, 2fe-2s | SAMN06295920_109131 | Not Available | - | 3924363 - 3924680 | 11347.3 |
| dna-3-methyladenine glycosylase ii | SAMN06295920_109132 | Not Available | + | 3924762 - 3925406 | 23108.7 |
| phenylalanyl-trna synthetase beta subunit | SAMN06295920_109133 | Not Available | - | 3925435 - 3927813 | 83410.0 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN06295920_109134 | Not Available | - | 3927810 - 3928934 | 41092.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.