Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus histidinilytica
Accession NumberFUYM00000000.1
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 1 | SAMN06295920_102338 | Not Available | + | 1127662 - 1129350 | 62133.0 |
| protoheme ix farnesyltransferase | SAMN06295920_102339 | Not Available | + | 1129434 - 1130342 | 32028.1 |
| hypothetical protein | SAMN06295920_102340 | Not Available | + | 1130339 - 1130467 | 4857.06 |
| cytochrome c oxidase assembly protein subunit 11 | SAMN06295920_102341 | Not Available | + | 1130464 - 1131042 | 20648.0 |
| cytochrome c oxidase subunit 3 | SAMN06295920_102342 | Not Available | + | 1131077 - 1131943 | 32197.4 |
| uncharacterized conserved protein, duf983 family | SAMN06295920_102343 | Not Available | + | 1132031 - 1132414 | 13454.0 |
| cytochrome oxidase assembly protein shyy1 | SAMN06295920_102344 | Not Available | + | 1132414 - 1133046 | 22652.1 |
| malonyl coa-acyl carrier protein transacylase | SAMN06295920_102345 | Not Available | - | 1133048 - 1134079 | 37077.0 |
| branched-chain alpha-keto acid dehydrogenase e1 component | SAMN06295920_102346 | Not Available | - | 1134072 - 1136279 | 79044.6 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN06295920_102347 | Not Available | + | 1136560 - 1138077 | 55154.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.