Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus histidinilytica
Accession NumberFUYM00000000.1
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | SAMN06295920_102308 | Not Available | - | 1088316 - 1090790 | 90696.3 |
| n-acetylmuramoyl-l-alanine amidase | SAMN06295920_102309 | Not Available | - | 1091150 - 1092295 | 41162.2 |
| rnase e | SAMN06295920_102310 | Not Available | + | 1092849 - 1095500 | 96897.0 |
| putative zn-dependent protease, contains tpr repeats | SAMN06295920_102311 | Not Available | + | 1095583 - 1096965 | 49069.9 |
| protein-disulfide isomerase | SAMN06295920_102312 | Not Available | + | 1096965 - 1097723 | 27597.4 |
| protein of unknown function | SAMN06295920_102313 | Not Available | - | 1097852 - 1098295 | 16325.3 |
| peptide/nickel transport system substrate-binding protein | SAMN06295920_102314 | Not Available | - | 1098331 - 1099818 | 53064.9 |
| peptide/nickel transport system substrate-binding protein/oligopeptide transport system substrate-binding protein | SAMN06295920_102315 | Not Available | - | 1099815 - 1101344 | 55910.1 |
| uncharacterized conserved protein, duf885 familyt | SAMN06295920_102316 | Not Available | + | 1101504 - 1103300 | 67883.0 |
| putative salt-induced outer membrane protein | SAMN06295920_102317 | Not Available | + | 1103406 - 1104323 | 33374.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.