Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingopyxidaceae
Genus
Sphingopyxis
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingopyxidaceae |
| Genus | Sphingopyxis |
| Species | Sphingopyxis indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
709261 bp
Thymine Count
713664 bp
Guanine Count
1367400 bp
Cytosine Count
1359477 bp
Genome Length
4149802 bp
Protein-coding Genes
3840 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Large packaging protein | SAMN06295955_110109 | Not Available | + | 2989356 - 2990666 | 46686.9 |
| uncharacterized conserved protein, laba/duf88 family | SAMN06295955_110110 | Not Available | + | 2990825 - 2991454 | 24345.0 |
| Portal protein | SAMN06295955_110111 | Not Available | + | 2991470 - 2992615 | 39784.6 |
| Hypothetical protein | SAMN06295955_110112 | Not Available | + | 2992685 - 2993020 | 11239.6 |
| Putative prohead protease | SAMN06295955_110113 | Not Available | + | 2993083 - 2993640 | 19710.0 |
| Putative major capsid protein | SAMN06295955_110114 | Not Available | + | 2993778 - 2994917 | 39532.6 |
| Putative tail fiber protein | SAMN06295955_110115 | Not Available | + | 2995221 - 2996735 | 51621.3 |
| hypothetical protein | SAMN06295955_110116 | Not Available | + | 2996732 - 2996887 | 5502.75 |
| Minor tail protein | SAMN06295955_110117 | Not Available | + | 2996902 - 2997183 | 9974.52 |
| phage conserved hypothetical protein, phie125 gp8 family | SAMN06295955_110118 | Not Available | + | 2997183 - 2997728 | 18364.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
