Salmonella enterica subsp. enterica serovar Newport str. SL254

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Newport str. SL254 is a gram-negative, rod-shaped bacterium that thrives at mesophilic temperatures, classified as a facultative anaerobe and a chemoheterotroph. This versatile microbe primarily resides in the intestines of warm-blooded animals, including humans, where it can cause gastrointestinal infections, but it can also be found in various environmental reservoirs such as soil, water, and contaminated food sources. As a gram-negative organism, Salmonella enterica possesses a thin peptidoglycan layer surrounded by an outer membrane rich in lipopolysaccharides, which contributes to its pathogenicity and ability to evade the host's immune response. The rod shape of the bacterium facilitates motility, allowing it to navigate through the viscous environment of the intestinal tract. Being mesophilic, it grows optimally at temperatures between 30°C and 37°C, aligning with the internal body temperature of its host.As a facultative anaerobe, SL254 can thrive in both aerobic and anaerobic environments, adapting its metabolic processes based on oxygen availability. Its classification as a chemoheterotroph indicates that it relies on organic compounds for carbon and energy, primarily deriving from the host’s nutrients during infections. This adaptability is critical for its survival in diverse environments and hosts. This particular strain of Salmonella enterica has garnered attention due to its antimicrobial resistance, particularly to commonly used antibiotics, posing challenges in clinical settings. Its ability to develop resistance mechanisms, such as efflux pumps and modified target sites, reflects a growing public health concern. Furthermore, serovar Newport has been implicated in several foodborne outbreaks, particularly associated with animal products such as poultry and beef, underscoring the importance of food safety measures in preventing transmission.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
StrainSL254

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. enterica serovar Newport str. SL254
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityYes

Genome Summary

Salmonella enterica subsp. enterica serovar Newport str. SL254


Gene Summary

Adenine Count

1154071 bp

Thymine Count

1152734 bp

Guanine Count

1260889 bp

Cytosine Count

1259947 bp

Genome Length

4827641 bp

Protein-coding Genes

4294 genes

Non-Coding Genes

440 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Bacteriophage lysis proteinSNSL254_RS06095Not Available+1075696 - 107614816361.6
Bacteriophage lysis proteinSNSL254_RS06100Not Available+1076166 - 107664517703.0
Bacteriophage dna packaging proteinSNSL254_RS06105Not Available+1076853 - 107738619658.5
Bacteriophage dna packaging proteinSNSL254_RS06110Not Available+1077343 - 107948180681.5
Conserved hypothetical bacteriophage proteinSNSL254_RS06115Not Available+1079478 - 10796847967.77
Bacteriophage portal proteinSNSL254_RS06120Not Available+1079681 - 108122857333.1
Bacteriophage clp protease involved in capsid processingSNSL254_RS06125Not Available+1081152 - 108323375191.3
Conserved hypothetical bacteriophage proteinSNSL254_RS06130Not Available+1083324 - 108364710943.0
Conserved hypothetical bacteriophage proteinSNSL254_RS06135Not Available+1083640 - 108393910870.2
Minor tail proteinSNSL254_RS06140Not Available+1083920 - 108448621375.4

Displaying genes 31 – 40 of 4936 in total

Metabolites

1854 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da

Displaying 1–10 of 1854 metabolites