Geobacillus thermodenitrificans NG80-2

Gram-positiveRodMotileFacultative aerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Anoxybacillaceae

Genus

Geobacillus

Description

Geobacillus thermodenitrificans (strain NG80-2) is a facultative aerobic thermophilic bacterium phylogenetically associated with the Firmicutes. It was isolated from oilfield in Dagang (Northern China) at a depth of 2000 m and a temperature of 73 degrees Celsius. The complete genome sequence consists of a 3,550,319-bp chromosome and a 57,693-bp plasmid. The genome reveals that NG80-2 is well equipped for adaptation into a wide variety of environmental niches (not only in geothermal areas, but also in temperate regions and permanently cold habitats), by possessing genes for utilization of a broad range of energy sources, genes encoding various transporters for efficient nutrient uptake and detoxification, and genes for a flexible respiration system. The proteome further reveals the presence of a long-chain alkane degradation pathway; and the function of the key enzyme in the pathway, the long-chain alkane monooxygenase LadA, is confirmed by in vivo and in vitro experiments. This strain can use crude oil as a sole carbon source and can degrade 16 to 36 carbon alkanes. It grows between 45 degrees Celsius and 73 degrees Celsius (optimum 65 degrees Celsius), and is capable of oxygen and nitrate respiration. The thermophilic soluble monomeric LadA is an ideal candidate for treatment of environmental oil pollutions and biosynthesis of complex molecules. Geobacillus thermodenitrificans NG80-2 also produces an emulsifier, which may be useful for high temperature biodegradation or other industrial purposes. (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyAnoxybacillaceae
GenusGeobacillus
SpeciesGeobacillus thermodenitrificans
StrainNG80-2

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Geobacillus thermodenitrificans NG80-2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperature65
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Geobacillus thermodenitrificans NG80-2


Gene Summary

Adenine Count

17778 bp

Thymine Count

16984 bp

Guanine Count

11506 bp

Cytosine Count

11425 bp

Genome Length

57693 bp

Protein-coding Genes

63 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
alpha,alpha-phosphotrehalaseGTNG_RS08590Not Available-1730475 - 173216666291.8
pts system trehalose-specific eiibc componentGTNG_RS08595Not Available-1732277 - 173369250313.6
merr family transcriptional regulatorGTNG_RS08600Not Available+1733983 - 173469027456.7
dna topoisomerase iv subunit aGTNG_RS08605Not Available-1735082 - 173752690841.5
dna topoisomerase iv subunit bGTNG_RS08610Not Available-1737587 - 173952472035.1
coa-binding proteinGTNG_RS08615Not Available-1739683 - 174010215884.2
hypothetical proteinGTNG_RS19280Not Available+1740651 - 174096511974.0
abc1 kinase family proteinGTNG_RS08625Not Available-1741113 - 174278962754.3
phasin family proteinGTNG_RS08630Not Available-1742841 - 174314011548.0
mbl fold metallo-hydrolaseGTNG_RS08635Not Available+1743235 - 174382821904.3

Displaying genes 1891 – 1900 of 3673 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites