Sulfolobus islandicus Y.N.15.51

CocciNon-motileFacultative aerobe

Kingdom

Thermoproteati

Phylum

Thermoproteota

Class

Thermoprotei

Order

Sulfolobales

Family

Sulfolobaceae

Genus

Saccharolobus

Description

Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone 2), also called Yellowstone 2, is an aerobic thermo-acidophilic archaeum commonly identified in hot, acidic sulfur springs and isolated from a hot spring at Yellowstone National Park. S. islandicus can grow both chemoautotrophically, using sulfur or hydrogen sulfide, and heterotrophically. Like other Sulfolobus spp., S. islandicus can play host to a number of plasmids and viruses which may be useful in developing tools for genetic analysis. (Adaptated from: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&cmd=ShowDetailView&TermToSearch=18651 and PMID:19435847). (HAMAP: SULIN)

Taxonomy

KingdomThermoproteati
PhylumThermoproteota
ClassThermoprotei
OrderSulfolobales
FamilySulfolobaceae
GenusSaccharolobus
SpeciesSaccharolobus islandicus
StrainY.N.15.51

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperature75
Temperature rangeHyperthermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Sulfolobus islandicus Y.N.15.51

Accession NumberNC_012623.1

Gene Summary

Adenine Count

906289 bp

Thymine Count

913369 bp

Guanine Count

491956 bp

Cytosine Count

500551 bp

Genome Length

2812165 bp

Protein-coding Genes

3120 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
rna-guided pseudouridylation complex pseudouridine synthase subunit cbf5YN1551_RS05355Not Available-983534 - 98428028417.8
trna pseudouridine synthase aYN1551_RS05360Not Available-984277 - 98457611418.7
50s ribosomal protein l14eYN1551_RS05365Not Available-984582 - 98487210784.4
dead/deah box helicaseYN1551_RS05370Not Available-984914 - 987652104454.0
atp-binding proteinYN1551_RS05375Not Available+987692 - 98941065129.9
rna polymerase subunit rpo13YN1551_RS05380Not Available+989411 - 98972512161.2
dna polymerase sliding clampYN1551_RS05385Not Available+989730 - 99047927499.3
amidohydrolase family proteinYN1551_RS05390Not Available-990446 - 99158542763.8
gtp cyclohydrolase iiaYN1551_RS05395Not Available-991558 - 99225627069.6
6,7-dimethyl-8-ribityllumazine synthaseYN1551_RS05400Not Available-992253 - 99271717164.1

Displaying genes 1131 – 1140 of 3251 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

44 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da

Displaying 1–10 of 44 metabolites