Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| feccd family abc transporter permease | HLAC_RS02675 | Not Available | + | 559909 - 561081 | 40614.5 |
| abc transporter atp-binding protein | HLAC_RS02680 | Not Available | + | 561082 - 561972 | 31580.9 |
| abc transporter substrate-binding protein | HLAC_RS02685 | Not Available | + | 562111 - 563358 | 45839.2 |
| fad-dependent oxidoreductase | HLAC_RS02690 | Not Available | + | 563587 - 564426 | 29922.0 |
| trmb family transcriptional regulator | HLAC_RS02695 | Not Available | - | 564523 - 565644 | 40592.4 |
| alpha-amylase family glycosyl hydrolase | HLAC_RS02700 | Not Available | - | 565736 - 568012 | 82788.2 |
| glycoside hydrolase family 15 protein | HLAC_RS02705 | Not Available | + | 568116 - 570266 | 77587.7 |
| hypothetical protein | HLAC_RS02710 | Not Available | - | 570685 - 570879 | 7436.33 |
| imidazole glycerol phosphate synthase subunit hisf | HLAC_RS02715 | Not Available | - | 570998 - 571816 | 29202.9 |
| glycosyltransferase | HLAC_RS02720 | Not Available | - | 571878 - 572951 | 38751.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.