Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class iv | HLAC_RS02290 | Not Available | + | 478779 - 479714 | 33136.5 |
| hypothetical protein | HLAC_RS02295 | Not Available | + | 479790 - 480203 | 14706.0 |
| bifunctional 2-dehydro-3-deoxygluconokinase/2-dehydro-3- deoxygalactonokinase | HLAC_RS02300 | Not Available | - | 480599 - 481564 | 33986.5 |
| hypothetical protein | HLAC_RS02305 | Not Available | - | 481713 - 482318 | 20138.5 |
| duf58 domain-containing protein | HLAC_RS02310 | Not Available | - | 482258 - 483604 | 47583.8 |
| hypothetical protein | HLAC_RS02315 | Not Available | - | 483601 - 484167 | 19775.5 |
| duf4129 domain-containing protein | HLAC_RS02320 | Not Available | - | 484167 - 485159 | 32898.0 |
| mbl fold metallo-hydrolase | HLAC_RS02325 | Not Available | - | 485253 - 486299 | 37128.7 |
| two-component system sensor histidine kinase ntrb | HLAC_RS02330 | Not Available | - | 486394 - 487530 | 42243.4 |
| hypothetical protein | HLAC_RS02335 | Not Available | + | 487702 - 488079 | 13489.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.