Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l40e | HLAC_RS17650 | Not Available | + | 394165 - 394314 | 5696.8 |
| aldo/keto reductase | HLAC_RS01850 | Not Available | + | 394490 - 395503 | 37934.7 |
| imidazole glycerol phosphate synthase subunit hish | HLAC_RS01855 | Not Available | - | 395542 - 396201 | 23620.3 |
| phosphonate abc transporter, permease protein phne | HLAC_RS01860 | Not Available | - | 396290 - 397381 | 40324.2 |
| phosphonate abc transporter atp-binding protein | HLAC_RS01865 | Not Available | - | 397404 - 398189 | 28404.3 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | HLAC_RS01870 | Not Available | - | 398218 - 399312 | 39280.6 |
| uracil-dna glycosylase | HLAC_RS01875 | Not Available | - | 399415 - 400029 | 21721.3 |
| glycerate kinase | HLAC_RS01880 | Not Available | - | 400284 - 401798 | 50437.8 |
| duf99 family protein | HLAC_RS01885 | Not Available | - | 401866 - 402453 | 21194.9 |
| duf5786 family protein | HLAC_RS01890 | Not Available | - | 402458 - 402640 | 6685.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.