Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna-guided endonuclease insq/tnpb family protein | HLAC_RS01795 | Not Available | - | 383690 - 384259 | 20133.8 |
| rna-guided endonuclease insq/tnpb family protein | HLAC_RS17645 | Not Available | + | 384411 - 385724 | 49784.1 |
| rna-guided endonuclease insq/tnpb family protein | HLAC_RS01810 | Not Available | - | 385777 - 386652 | 30766.3 |
| leucine--trna ligase | HLAC_RS01815 | Not Available | - | 386724 - 389444 | 101819.0 |
| hypothetical protein | HLAC_RS01820 | Not Available | - | 389572 - 391767 | 78164.5 |
| hypothetical protein | HLAC_RS01825 | Not Available | + | 392007 - 392408 | 14744.4 |
| phosphoribosyl-atp diphosphatase | HLAC_RS01830 | Not Available | - | 392423 - 392752 | 12339.0 |
| pyridoxal 5'-phosphate synthase glutaminase subunit pdxt | HLAC_RS01835 | Not Available | - | 392749 - 393342 | 20851.6 |
| preprotein translocase subunit sec61beta | HLAC_RS01840 | Not Available | - | 393456 - 393620 | 5657.83 |
| thioredoxin family protein | HLAC_RS01845 | Not Available | + | 393781 - 394050 | 9991.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.