Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hsp20/alpha crystallin family protein | HLAC_RS01705 | Not Available | - | 366252 - 366806 | 19940.3 |
| stage ii sporulation protein m | HLAC_RS01710 | Not Available | - | 366926 - 368434 | 51748.8 |
| rna-guided endonuclease insq/tnpb family protein | HLAC_RS17640 | Not Available | - | 368485 - 368756 | 9614.36 |
| gamma-glutamylcyclotransferase family protein | HLAC_RS19920 | Not Available | + | 368901 - 369395 | 17904.2 |
| threonine ammonia-lyase | HLAC_RS01720 | Not Available | + | 369667 - 370878 | 43029.8 |
| cdp-2,3-bis-(o-geranylgeranyl)-sn-glycerol synthase | HLAC_RS01725 | Not Available | - | 370895 - 371437 | 18602.8 |
| proline dehydrogenase family protein | HLAC_RS01730 | Not Available | + | 371563 - 372402 | 31347.6 |
| duf502 domain-containing protein | HLAC_RS01735 | Not Available | + | 372507 - 373217 | 25269.5 |
| branched-chain amino acid transaminase | HLAC_RS01740 | Not Available | - | 373250 - 374179 | 34670.1 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | HLAC_RS01745 | Not Available | - | 374364 - 375074 | 24746.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.