Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | HLAC_RS01565 | Not Available | - | 340893 - 342665 | 64920.6 |
| winged helix-turn-helix domain-containing protein | HLAC_RS01570 | Not Available | - | 342766 - 343155 | 13378.0 |
| helix-turn-helix domain-containing protein | HLAC_RS01575 | Not Available | + | 343310 - 343945 | 22796.6 |
| hypothetical protein | HLAC_RS19160 | Not Available | + | 344094 - 344249 | 5473.45 |
| pyridoxamine 5'-phosphate oxidase family protein | HLAC_RS01585 | Not Available | + | 344369 - 344836 | 17400.2 |
| nad(p)/fad-dependent oxidoreductase | HLAC_RS01590 | Not Available | - | 345218 - 346288 | 38044.5 |
| dhh family phosphoesterase | HLAC_RS01595 | Not Available | - | 346431 - 347867 | 50393.9 |
| dihydropteroate synthase | HLAC_RS01600 | Not Available | - | 347904 - 350540 | 90633.2 |
| abc transporter atp-binding protein | HLAC_RS01605 | Not Available | + | 350681 - 351760 | 37911.8 |
| abc transporter permease | HLAC_RS01610 | Not Available | + | 351757 - 352512 | 26404.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.