Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | HLAC_RS01190 | Not Available | + | 258099 - 258578 | 17295.8 |
| nadph-dependent f420 reductase | HLAC_RS01195 | Not Available | + | 258693 - 259361 | 22754.5 |
| polyprenyl synthetase family protein | HLAC_RS01200 | Not Available | + | 259420 - 260262 | 30111.9 |
| hypothetical protein | HLAC_RS01205 | Not Available | - | 260285 - 260785 | 18343.0 |
| abc transporter atp-binding protein | HLAC_RS01210 | Not Available | + | 260893 - 263604 | 98013.7 |
| abc transporter substrate-binding protein | HLAC_RS01215 | Not Available | + | 263745 - 265472 | 62566.1 |
| abc transporter permease | HLAC_RS01220 | Not Available | + | 265497 - 266516 | 36939.9 |
| abc transporter permease | HLAC_RS01225 | Not Available | + | 266513 - 267442 | 33051.5 |
| hypothetical protein | HLAC_RS01230 | Not Available | + | 267446 - 267796 | 11732.5 |
| abc transporter atp-binding protein | HLAC_RS01235 | Not Available | - | 267904 - 269235 | 48862.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.