Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-directed dna polymerase ii large subunit | HLAC_RS00760 | Not Available | + | 156012 - 160112 | 150921.0 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | HLAC_RS00765 | Not Available | - | 160558 - 161202 | 22008.7 |
| elongation factor ef-2 | HLAC_RS00770 | Not Available | + | 161417 - 163606 | 80933.8 |
| duf3592 domain-containing protein | HLAC_RS00775 | Not Available | - | 163679 - 164173 | 17239.8 |
| hypothetical protein | HLAC_RS18670 | Not Available | + | 164449 - 164610 | 5041.93 |
| amino acid-binding protein | HLAC_RS00780 | Not Available | + | 164607 - 165221 | 21539.9 |
| homoserine dehydrogenase | HLAC_RS00785 | Not Available | + | 165218 - 166204 | 33465.8 |
| translation elongation factor ef-1 subunit alpha | HLAC_RS00790 | Not Available | + | 166392 - 167657 | 45822.4 |
| 30s ribosomal protein s10 | HLAC_RS00795 | Not Available | + | 167661 - 167969 | 11386.5 |
| rhomboid family intramembrane serine protease | HLAC_RS00800 | Not Available | - | 168080 - 168640 | 18795.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.