Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | HLAC_RS00710 | Not Available | + | 147233 - 148336 | 40863.3 |
| alpha-ketoacid dehydrogenase subunit beta | HLAC_RS00715 | Not Available | + | 148337 - 149323 | 35791.6 |
| 2-oxo acid dehydrogenase subunit e2 | HLAC_RS00720 | Not Available | + | 149326 - 150945 | 56472.1 |
| dihydrolipoyl dehydrogenase | HLAC_RS00725 | Not Available | + | 150945 - 152372 | 49379.6 |
| copz family metallochaperone | HLAC_RS00730 | Not Available | - | 152412 - 152609 | 6599.26 |
| asnc family transcriptional regulator | HLAC_RS00735 | Not Available | + | 152741 - 153355 | 22680.3 |
| hypothetical protein | HLAC_RS00740 | Not Available | - | 153791 - 154177 | 14043.1 |
| duf5783 family protein | HLAC_RS00745 | Not Available | + | 154553 - 154882 | 13072.9 |
| nifu family protein | HLAC_RS00750 | Not Available | + | 154985 - 155362 | 12883.8 |
| ppc domain-containing dna-binding protein | HLAC_RS00755 | Not Available | + | 155576 - 155995 | 15491.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.