Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | HLAC_RS00460 | Not Available | - | 95146 - 95736 | 21652.1 |
| hypothetical protein | HLAC_RS00465 | Not Available | - | 95733 - 96116 | 13992.5 |
| duf5787 family protein | HLAC_RS00470 | Not Available | + | 96254 - 97210 | 34596.6 |
| cyclic nucleotide-binding/cbs domain-containing protein | HLAC_RS00475 | Not Available | + | 97267 - 97674 | 14261.7 |
| llm class flavin-dependent oxidoreductase | HLAC_RS00480 | Not Available | + | 97884 - 99260 | 50812.2 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | HLAC_RS00485 | Not Available | - | 99610 - 100083 | 16937.6 |
| aconitate hydratase | HLAC_RS00490 | Not Available | + | 100350 - 102335 | 70554.1 |
| dicarboxylate/amino acid:cation symporter | HLAC_RS00495 | Not Available | - | 102386 - 103693 | 44887.2 |
| 30s ribosomal protein s7 | HLAC_RS00500 | Not Available | - | 103848 - 104501 | 23985.7 |
| 30s ribosomal protein s12 | HLAC_RS00505 | Not Available | - | 104498 - 104926 | 15562.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.