Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | HLAC_RS13780 | Not Available | + | 34655 - 35083 | 15262.8 |
| is5 family transposase | HLAC_RS13785 | Not Available | + | 35219 - 36040 | 31579.6 |
| ish3-like element ishla1 family transposase | HLAC_RS13790 | Not Available | + | 36108 - 37274 | 44361.3 |
| aaa family atpase | HLAC_RS17900 | Not Available | - | 37432 - 38754 | 50846.2 |
| ktsc domain-containing protein | HLAC_RS17905 | Not Available | - | 38773 - 38985 | 8020.24 |
| duf2797 domain-containing protein | HLAC_RS17910 | Not Available | + | 39202 - 40272 | 39475.9 |
| hypothetical protein | HLAC_RS18835 | Not Available | + | 40247 - 40810 | 20894.0 |
| piwi domain-containing protein | HLAC_RS13800 | Not Available | + | 40738 - 42894 | 80138.8 |
| ish6-like element ishla10 family transposase | HLAC_RS13805 | Not Available | + | 42942 - 44279 | 49432.1 |
| hypothetical protein | HLAC_RS18840 | Not Available | + | 44305 - 44469 | 5908.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.