Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| era-like gtp-binding protein | HLAC_RS13640 | Not Available | - | 2734431 - 2735072 | 23706.9 |
| cdc6/cdc18 family protein | HLAC_RS13655 | Not Available | + | 226 - 1554 | 49734.2 |
| ish6 family transposase | HLAC_RS19575 | Not Available | - | 1965 - 2118 | 5746.76 |
| ish3-like element ishla1 family transposase | HLAC_RS13660 | Not Available | - | 2774 - 3940 | 44361.3 |
| hypothetical protein | HLAC_RS13665 | Not Available | + | 4051 - 5256 | 44915.1 |
| tyrosine-type recombinase/integrase | HLAC_RS13670 | Not Available | + | 5921 - 7027 | 42343.2 |
| hypothetical protein | HLAC_RS13675 | Not Available | + | 7051 - 7605 | 20743.0 |
| hypothetical protein | HLAC_RS13680 | Not Available | + | 8014 - 9033 | 38692.4 |
| hypothetical protein | HLAC_RS13685 | Not Available | - | 9091 - 10257 | 43700.4 |
| dead/deah box helicase | HLAC_RS13690 | Not Available | - | 10250 - 12004 | 67344.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.