Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter substrate binding subunit | HLAC_RS13390 | Not Available | - | 2688799 - 2690094 | 46530.8 |
| hypothetical protein | HLAC_RS13395 | Not Available | + | 2690267 - 2691115 | 29473.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | HLAC_RS13400 | Not Available | + | 2691193 - 2691933 | 25399.5 |
| nadh:flavin oxidoreductase | HLAC_RS13405 | Not Available | + | 2692074 - 2693180 | 38793.8 |
| imidazoleglycerol-phosphate dehydratase hisb | HLAC_RS13410 | Not Available | + | 2693410 - 2694006 | 21414.5 |
| atp-dependent dna helicase | HLAC_RS13415 | Not Available | + | 2694089 - 2696563 | 89533.2 |
| keops complex subunit cgi121 | HLAC_RS13420 | Not Available | + | 2696560 - 2697159 | 20923.2 |
| Trna-pseudo | Not Available | Not Available | + | 2697337 - 2697409 | Not Available |
| imp cyclohydrolase | HLAC_RS13430 | Not Available | + | 2697597 - 2698205 | 21122.3 |
| helix-turn-helix domain-containing protein | HLAC_RS13435 | Not Available | - | 2698403 - 2698780 | 14051.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.