Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| apc family permease | HLAC_RS13340 | Not Available | - | 2677065 - 2678462 | 48164.9 |
| tetratricopeptide repeat protein | HLAC_RS13345 | Not Available | + | 2678797 - 2679702 | 32892.9 |
| duf424 domain-containing protein | HLAC_RS13350 | Not Available | + | 2679703 - 2680002 | 10698.4 |
| hypothetical protein | HLAC_RS13355 | Not Available | + | 2680046 - 2680360 | 11667.5 |
| cation:proton antiporter regulatory subunit | HLAC_RS13360 | Not Available | + | 2680441 - 2680932 | 18417.3 |
| pyridoxal-phosphate-dependent aminotransferase family protein | HLAC_RS13365 | Not Available | - | 2681006 - 2682118 | 41955.3 |
| amino acid permease | HLAC_RS13370 | Not Available | + | 2682381 - 2684741 | 82138.0 |
| hypothetical protein | HLAC_RS13375 | Not Available | + | 2685204 - 2685461 | 9599.0 |
| abc transporter atp-binding protein | HLAC_RS13380 | Not Available | - | 2685857 - 2686981 | 40106.0 |
| abc transporter permease | HLAC_RS13385 | Not Available | - | 2686971 - 2688791 | 63844.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.