Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i-d crispr-associated helicase cas3' | HLAC_RS18500 | Not Available | + | 329495 - 331648 | 81149.7 |
| crispr-associated protein cas4 | HLAC_RS17285 | Not Available | + | 331645 - 332262 | 23520.6 |
| crispr-associated endonuclease cas1 | HLAC_RS17290 | Not Available | + | 332259 - 333254 | 37601.3 |
| crispr-associated endonuclease cas2 | HLAC_RS18505 | Not Available | + | 333257 - 333529 | 10501.0 |
| type ii toxin-antitoxin system vapc family toxin | HLAC_RS17295 | Not Available | - | 339519 - 339875 | 13072.2 |
| antitoxin vapb family protein | HLAC_RS17300 | Not Available | - | 339910 - 340152 | 9101.66 |
| dna polymerase i | HLAC_RS19750 | Not Available | - | 340168 - 340617 | 17143.8 |
| tyrosine-type recombinase/integrase | HLAC_RS17310 | Not Available | - | 340614 - 341231 | 23031.1 |
| type iv pilin | HLAC_RS18515 | Not Available | - | 341444 - 342091 | 23703.3 |
| ish3-like element ishla1 family transposase | HLAC_RS17315 | Not Available | + | 342142 - 343308 | 44361.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.