Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | HLAC_RS13045 | Not Available | + | 2610310 - 2612481 | 82103.7 |
| hypothetical protein | HLAC_RS13050 | Not Available | - | 2612521 - 2612880 | 12292.7 |
| tata-box-binding protein | HLAC_RS13055 | Not Available | - | 2612959 - 2613516 | 19564.2 |
| thump domain-containing protein | HLAC_RS13060 | Not Available | + | 2613604 - 2614674 | 37351.5 |
| orc1-type dna replication protein | HLAC_RS13065 | Not Available | + | 2614867 - 2615994 | 42008.0 |
| ribose-5-phosphate isomerase rpia | HLAC_RS13070 | Not Available | + | 2616062 - 2616784 | 24282.4 |
| duf1931 family protein | HLAC_RS13075 | Not Available | - | 2616883 - 2617050 | 6149.05 |
| nickel pincer cofactor biosynthesis protein larb | HLAC_RS13080 | Not Available | + | 2617238 - 2618020 | 26109.3 |
| hypothetical protein | HLAC_RS19325 | Not Available | + | 2618147 - 2618299 | 5445.15 |
| giy-yig nuclease family protein | HLAC_RS13085 | Not Available | + | 2618370 - 2618636 | 9742.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.