Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atpase domain-containing protein | HLAC_RS12740 | Not Available | + | 2542606 - 2543355 | 27513.8 |
| type ii/iv secretion system atpase subunit | HLAC_RS12745 | Not Available | + | 2543432 - 2545105 | 62625.2 |
| archaellar assembly protein flaj | HLAC_RS12750 | Not Available | + | 2545108 - 2546844 | 63793.0 |
| is200/is605-like element ishla15 family transposase | HLAC_RS12755 | Not Available | + | 2547017 - 2547421 | 15505.1 |
| rna-guided endonuclease insq/tnpb family protein | HLAC_RS12760 | Not Available | + | 2547423 - 2548664 | 46716.2 |
| hu family dna-binding protein | HLAC_RS19985 | Not Available | - | 2548676 - 2549296 | 21938.5 |
| nad-dependent epimerase/dehydratase family protein | HLAC_RS12775 | Not Available | - | 2549595 - 2550533 | 32992.9 |
| zinc metalloprotease htpx | HLAC_RS12780 | Not Available | + | 2550618 - 2551490 | 32512.7 |
| iclr family transcriptional regulator | HLAC_RS12785 | Not Available | - | 2552279 - 2553067 | 28705.5 |
| mfs transporter | HLAC_RS12790 | Not Available | + | 2553189 - 2554439 | 42649.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.