Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is4 family transposase | HLAC_RS17245 | Not Available | - | 314401 - 315675 | 49165.0 |
| hnh endonuclease | HLAC_RS18485 | Not Available | - | 316024 - 316923 | 33562.3 |
| is4 family transposase | HLAC_RS17250 | Not Available | - | 316977 - 318251 | 49165.0 |
| eco57i restriction-modification methylase domain-containing protein | HLAC_RS17255 | Not Available | - | 318350 - 321418 | 115721.0 |
| ish6-like element ishla10 family transposase | HLAC_RS17260 | Not Available | + | 321958 - 323295 | 49432.1 |
| hypothetical protein | HLAC_RS20050 | Not Available | - | 323252 - 323668 | 14951.9 |
| crispr system precrrna processing endoribonuclease ramp protein cas6 | HLAC_RS17265 | Not Available | + | 323793 - 324659 | 31261.9 |
| type i-d crispr-associated protein cas10d/csc3 | HLAC_RS17270 | Not Available | + | 324656 - 327760 | 114829.0 |
| type i-d crispr-associated protein cas7/csc2 | HLAC_RS17275 | Not Available | + | 327757 - 328746 | 35462.0 |
| type i-d crispr-associated protein cas5/csc1 | HLAC_RS18495 | Not Available | + | 328756 - 329502 | 27956.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.