Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase type ii | HLAC_RS12490 | Not Available | + | 2495510 - 2496193 | 24896.9 |
| protein sorting system archaetidylserine decarboxylase | HLAC_RS12495 | Not Available | - | 2496250 - 2496882 | 22722.0 |
| aaa family atpase | HLAC_RS12500 | Not Available | - | 2496885 - 2497934 | 38421.1 |
| abc transporter substrate-binding protein | HLAC_RS12505 | Not Available | + | 2498240 - 2499598 | 47783.9 |
| carbohydrate abc transporter permease | HLAC_RS12510 | Not Available | + | 2499630 - 2500655 | 37831.8 |
| carbohydrate abc transporter permease | HLAC_RS12515 | Not Available | + | 2500652 - 2501593 | 33859.5 |
| abc transporter atp-binding protein | HLAC_RS12520 | Not Available | + | 2501705 - 2502856 | 41889.4 |
| hypothetical protein | HLAC_RS12525 | Not Available | - | 2502903 - 2503583 | 23107.7 |
| shoct domain-containing protein | HLAC_RS12530 | Not Available | - | 2503653 - 2504072 | 16147.2 |
| duf192 domain-containing protein | HLAC_RS12535 | Not Available | - | 2504134 - 2504613 | 16904.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.