Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dodecin | HLAC_RS12390 | Not Available | + | 2473964 - 2474164 | 7404.45 |
| alanyl-trna editing protein | HLAC_RS12395 | Not Available | + | 2474356 - 2475654 | 44969.1 |
| air synthase family protein | HLAC_RS12400 | Not Available | + | 2475651 - 2476643 | 33451.9 |
| acyl-coa dehydrogenase family protein | HLAC_RS12405 | Not Available | + | 2476719 - 2477879 | 41618.1 |
| had family hydrolase | HLAC_RS12410 | Not Available | + | 2477876 - 2478529 | 22721.4 |
| duf5822 domain-containing protein | HLAC_RS12415 | Not Available | - | 2478548 - 2478871 | 11158.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | HLAC_RS12420 | Not Available | + | 2479006 - 2479812 | 28233.0 |
| duf460 domain-containing protein | HLAC_RS12425 | Not Available | + | 2480557 - 2482614 | 76301.0 |
| tyrosine--trna ligase | HLAC_RS12430 | Not Available | + | 2482715 - 2483701 | 36420.4 |
| endonuclease nucs domain-containing protein | HLAC_RS12435 | Not Available | - | 2483750 - 2484502 | 26865.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.