Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna-guided endonuclease insq/tnpb family protein | HLAC_RS12245 | Not Available | - | 2442192 - 2443973 | 64515.4 |
| y-family dna polymerase | HLAC_RS12250 | Not Available | + | 2444145 - 2445575 | 50111.4 |
| nudix hydrolase | HLAC_RS12255 | Not Available | + | 2445661 - 2446206 | 20180.9 |
| cpbp family intramembrane glutamic endopeptidase | HLAC_RS12260 | Not Available | + | 2446282 - 2447235 | 32248.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 2448035 - 2448394 | Not Available |
| tigr00296 family protein | HLAC_RS12265 | Not Available | + | 2448558 - 2449160 | 21525.0 |
| nicotinate phosphoribosyltransferase | HLAC_RS12270 | Not Available | - | 2449231 - 2450391 | 40968.5 |
| hvo_1808 family surface protein | HLAC_RS12275 | Not Available | - | 2450530 - 2452317 | 63403.1 |
| cysteine hydrolase family protein | HLAC_RS12280 | Not Available | + | 2452436 - 2453014 | 21476.3 |
| hypothetical protein | HLAC_RS12285 | Not Available | + | 2453093 - 2453668 | 19390.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.