Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l2 | HLAC_RS12150 | Not Available | - | 2425462 - 2426184 | 25626.6 |
| 50s ribosomal protein l23 | HLAC_RS12155 | Not Available | - | 2426186 - 2426440 | 9409.11 |
| 50s ribosomal protein l4 | HLAC_RS12160 | Not Available | - | 2426437 - 2427183 | 26369.5 |
| 50s ribosomal protein l3 | HLAC_RS12165 | Not Available | - | 2427187 - 2428203 | 37357.8 |
| putative rna uridine n3 methyltransferase | HLAC_RS12170 | Not Available | - | 2428208 - 2429074 | 31182.9 |
| pqq-dependent sugar dehydrogenase | HLAC_RS12175 | Not Available | - | 2429276 - 2430496 | 43082.4 |
| Trna-gly | Not Available | Not Available | + | 2430648 - 2430718 | Not Available |
| redoxin domain-containing protein | HLAC_RS12185 | Not Available | - | 2431021 - 2431548 | 18741.9 |
| deda family protein | HLAC_RS12190 | Not Available | + | 2431737 - 2432285 | 18075.1 |
| acyl-coa carboxylase subunit beta | HLAC_RS12195 | Not Available | - | 2432295 - 2434094 | 64789.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.