Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nog1 family protein | HLAC_RS11415 | Not Available | + | 2288251 - 2289237 | 37055.2 |
| simpl domain-containing protein | HLAC_RS11420 | Not Available | - | 2289339 - 2290094 | 25978.5 |
| formate/nitrite transporter family protein | HLAC_RS11425 | Not Available | - | 2290185 - 2292416 | 79725.3 |
| tigr00341 family protein | HLAC_RS11430 | Not Available | - | 2292616 - 2293890 | 44509.1 |
| hypothetical protein | HLAC_RS11435 | Not Available | + | 2294110 - 2294361 | 8981.56 |
| homoserine kinase | HLAC_RS11440 | Not Available | + | 2294500 - 2295381 | 29567.9 |
| class i sam-dependent methyltransferase | HLAC_RS11445 | Not Available | - | 2295826 - 2296398 | 20481.3 |
| aminotransferase class v-fold plp-dependent enzyme | HLAC_RS11450 | Not Available | - | 2296444 - 2297583 | 40932.5 |
| thioredoxin | HLAC_RS11455 | Not Available | - | 2297584 - 2297925 | 12052.9 |
| duf5817 domain-containing protein | HLAC_RS11460 | Not Available | + | 2298064 - 2298594 | 19215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.