Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxykinase (atp) | HLAC_RS11115 | Not Available | + | 2222432 - 2223946 | 54980.3 |
| hth-type transcriptional regulator xacr | HLAC_RS11120 | Not Available | + | 2224358 - 2225113 | 27468.8 |
| mannonate dehydratase | HLAC_RS11125 | Not Available | - | 2225552 - 2226505 | 36041.0 |
| aldehyde dehydrogenase family protein | HLAC_RS11130 | Not Available | - | 2226634 - 2228082 | 50742.0 |
| d-xylose 1-dehydrogenase gfo6 | HLAC_RS11135 | Not Available | + | 2228250 - 2229335 | 39809.4 |
| mandelate racemase/muconate lactonizing enzyme family protein | HLAC_RS11140 | Not Available | + | 2229535 - 2230773 | 45563.2 |
| fumarylacetoacetate hydrolase family protein | HLAC_RS11145 | Not Available | + | 2231026 - 2231901 | 31555.3 |
| archaea-specific smc-related protein | HLAC_RS11150 | Not Available | - | 2232423 - 2234351 | 73485.2 |
| class i sam-dependent methyltransferase | HLAC_RS11155 | Not Available | + | 2235025 - 2235618 | 21618.4 |
| sjogren's syndrome/scleroderma autoantigen 1 family protein | HLAC_RS11160 | Not Available | - | 2235632 - 2236264 | 22399.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.