Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair endonuclease mutl | HLAC_RS11060 | Not Available | + | 2211745 - 2213499 | 60255.9 |
| hypothetical protein | HLAC_RS11065 | Not Available | + | 2213593 - 2214111 | 19242.5 |
| mechanosensitive ion channel family protein | HLAC_RS11070 | Not Available | - | 2214146 - 2215366 | 43890.1 |
| hypothetical protein | HLAC_RS11075 | Not Available | - | 2215473 - 2216807 | 46354.0 |
| hypothetical protein | HLAC_RS11085 | Not Available | - | 2217213 - 2217482 | 9540.66 |
| hpp family protein | HLAC_RS11090 | Not Available | + | 2217609 - 2218103 | 18237.4 |
| zinc-dependent metalloprotease | HLAC_RS11095 | Not Available | - | 2218307 - 2219407 | 39708.6 |
| m20/m25/m40 family metallo-hydrolase | HLAC_RS11100 | Not Available | + | 2219556 - 2220620 | 37356.0 |
| Trna-glu | Not Available | Not Available | + | 2220742 - 2220816 | Not Available |
| rod-determining factor rdfa | HLAC_RS11110 | Not Available | - | 2221316 - 2221945 | 22365.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.