Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adp-forming succinate--coa ligase subunit beta | HLAC_RS10960 | Not Available | + | 2190338 - 2191483 | 41220.2 |
| succinate--coa ligase subunit alpha | HLAC_RS10965 | Not Available | + | 2191480 - 2192349 | 29646.6 |
| arsr family transcriptional regulator | HLAC_RS10970 | Not Available | + | 2192711 - 2193028 | 11456.2 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase | HLAC_RS10975 | Not Available | + | 2193098 - 2194402 | 47605.5 |
| hypothetical protein | HLAC_RS10980 | Not Available | + | 2194496 - 2194687 | 7074.0 |
| amp-dependent synthetase/ligase | HLAC_RS10985 | Not Available | - | 2194713 - 2196770 | 75697.0 |
| helicase c-terminal domain-containing protein | HLAC_RS10990 | Not Available | + | 2196905 - 2198830 | 69753.0 |
| upf0175 family protein | HLAC_RS10995 | Not Available | + | 2199210 - 2199401 | 6593.63 |
| 60s ribosomal export protein nmd3 | HLAC_RS11000 | Not Available | - | 2199827 - 2200933 | 39982.9 |
| dna-binding protein | HLAC_RS11005 | Not Available | + | 2201058 - 2201411 | 13454.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.