Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | HLAC_RS10340 | Not Available | + | 2067295 - 2067897 | 21894.6 |
| tigr04347 family pseudo-sam/spasm protein | HLAC_RS10345 | Not Available | - | 2068072 - 2069301 | 44599.9 |
| htur_1727 family rsam-partnered candidate ripp | HLAC_RS10350 | Not Available | - | 2069298 - 2069672 | 13346.9 |
| helix-turn-helix domain-containing protein | HLAC_RS10355 | Not Available | + | 2069881 - 2070636 | 27352.4 |
| heavy metal translocating p-type atpase | HLAC_RS10360 | Not Available | + | 2070733 - 2073171 | 83874.0 |
| molybdopterin-dependent oxidoreductase | HLAC_RS10370 | Not Available | + | 2073659 - 2074117 | 16499.6 |
| hypothetical protein | HLAC_RS10375 | Not Available | + | 2074501 - 2075439 | 34815.4 |
| chrd domain-containing protein | HLAC_RS10380 | Not Available | - | 2075560 - 2077818 | 81075.1 |
| duf1328 domain-containing protein | HLAC_RS10385 | Not Available | - | 2078254 - 2078484 | 8053.35 |
| hypothetical protein | HLAC_RS10390 | Not Available | - | 2078778 - 2079029 | 9009.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.