Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| halod1 output domain-containing protein | HLAC_RS17720 | Not Available | + | 1027405 - 1027731 | 11959.7 |
| helix-turn-helix domain-containing protein | HLAC_RS05115 | Not Available | - | 1027757 - 1028485 | 26712.2 |
| s-adenosyl-l-methionine hydroxide adenosyltransferase family protein | HLAC_RS05120 | Not Available | - | 1028906 - 1029742 | 29469.5 |
| nicotinamide-nucleotide adenylyltransferase | HLAC_RS05125 | Not Available | - | 1029920 - 1030450 | 19807.4 |
| atp-dependent protease lonb | HLAC_RS05130 | Not Available | + | 1030622 - 1032919 | 81869.8 |
| cbs domain-containing protein | HLAC_RS05135 | Not Available | + | 1032970 - 1033752 | 28596.2 |
| glycine zipper domain-containing protein | HLAC_RS05140 | Not Available | + | 1033820 - 1034074 | 8263.55 |
| nop5/nop56 family protein | HLAC_RS05145 | Not Available | + | 1034162 - 1035025 | 31047.8 |
| fibrillarin-like rrna/trna 2'-o-methyltransferase | HLAC_RS05150 | Not Available | + | 1035022 - 1035660 | 23170.2 |
| hypothetical protein | HLAC_RS05155 | Not Available | - | 1035712 - 1036020 | 11231.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.