Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ybjq family protein | HLAC_RS05015 | Not Available | + | 1008234 - 1008548 | 11127.2 |
| methylmalonyl-coa mutase | HLAC_RS05020 | Not Available | - | 1008559 - 1010235 | 62141.9 |
| o-methyltransferase | HLAC_RS05025 | Not Available | + | 1010369 - 1011034 | 23496.3 |
| had family hydrolase | HLAC_RS05030 | Not Available | - | 1011084 - 1011737 | 24225.3 |
| metallophosphoesterase family protein | HLAC_RS05035 | Not Available | + | 1011853 - 1012524 | 24531.6 |
| hypothetical protein | HLAC_RS05040 | Not Available | - | 1012561 - 1012878 | 10296.0 |
| nad(p)/fad-dependent oxidoreductase | HLAC_RS05045 | Not Available | + | 1013044 - 1014120 | 37915.6 |
| sdr family nad(p)-dependent oxidoreductase | HLAC_RS05050 | Not Available | + | 1014232 - 1015005 | 26673.5 |
| rna-guided endonuclease insq/tnpb family protein | HLAC_RS05055 | Not Available | + | 1015294 - 1015707 | 15305.1 |
| ish3-like element ishla8 family transposase | HLAC_RS05060 | Not Available | + | 1015853 - 1017025 | 44400.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.