Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | HLAC_RS04915 | Not Available | - | 987151 - 989088 | 71928.9 |
| hypothetical protein | HLAC_RS04920 | Not Available | - | 989197 - 990078 | 31966.0 |
| iron-containing alcohol dehydrogenase family protein | HLAC_RS04925 | Not Available | + | 990229 - 991440 | 41946.9 |
| mate family efflux transporter | HLAC_RS04930 | Not Available | - | 991735 - 993237 | 51973.3 |
| eama family transporter | HLAC_RS04935 | Not Available | - | 993369 - 993800 | 14643.4 |
| histidine kinase n-terminal 7tm domain-containing protein | HLAC_RS04940 | Not Available | - | 993873 - 995621 | 62034.7 |
| ubia family prenyltransferase | HLAC_RS04945 | Not Available | - | 995708 - 996811 | 36902.2 |
| voc family protein | HLAC_RS04950 | Not Available | + | 997006 - 997773 | 29923.9 |
| pyridoxamine 5'-phosphate oxidase family protein | HLAC_RS04955 | Not Available | - | 997805 - 998266 | 16730.5 |
| pas domain s-box protein | HLAC_RS04960 | Not Available | - | 999136 - 1001901 | 100901.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.