Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylglycinamide formyltransferase | HLAC_RS04565 | Not Available | + | 923929 - 925536 | 57511.5 |
| digeranylgeranylglycerophospholipid reductase | HLAC_RS04570 | Not Available | - | 925574 - 926809 | 46173.3 |
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | HLAC_RS04575 | Not Available | - | 927011 - 927874 | 31274.2 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | HLAC_RS04580 | Not Available | - | 927878 - 929635 | 63812.3 |
| ferredoxin--nadp reductase | HLAC_RS04585 | Not Available | + | 929971 - 930615 | 22032.9 |
| pyridoxal phosphate-dependent aminotransferase | HLAC_RS04590 | Not Available | - | 930980 - 932083 | 39874.4 |
| metal-dependent hydrolase | HLAC_RS04595 | Not Available | + | 932248 - 932751 | 17801.9 |
| php domain-containing protein | HLAC_RS04600 | Not Available | - | 932785 - 933603 | 30301.4 |
| hypothetical protein | HLAC_RS04605 | Not Available | + | 933743 - 934039 | 11170.9 |
| arginase | HLAC_RS04610 | Not Available | - | 934055 - 934960 | 31338.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.