Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | HLAC_RS04240 | Not Available | + | 848054 - 848560 | 17541.1 |
| acyl-coa thioesterase | HLAC_RS04245 | Not Available | - | 848586 - 849068 | 17675.6 |
| bifunctional nuclease family protein | HLAC_RS04250 | Not Available | - | 849125 - 849577 | 15985.6 |
| arsr/smtb family transcription factor | HLAC_RS04255 | Not Available | - | 849666 - 850370 | 24559.6 |
| trab/gumn family protein | HLAC_RS04260 | Not Available | + | 850479 - 852290 | 62246.8 |
| zn-dependent protease | HLAC_RS04265 | Not Available | + | 852340 - 853008 | 23387.2 |
| phosphoribosylformylglycinamidine cyclo-ligase | HLAC_RS04270 | Not Available | + | 853107 - 854138 | 35597.9 |
| duf6360 family protein | HLAC_RS04275 | Not Available | - | 854638 - 854934 | 10522.9 |
| nitrite/sulfite reductase | HLAC_RS04280 | Not Available | - | 854937 - 856706 | 65773.4 |
| hypothetical protein | HLAC_RS04285 | Not Available | - | 856799 - 857104 | 11113.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.