Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halorubrum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halorubrum |
| Species | Halorubrum lacusprofundi |
| Strain | ATCC 49239 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Genome Summary
Halorubrum lacusprofundi ATCC 49239
Accession NumberNC_012029.1
Gene Summary
Adenine Count
452990 bp
Thymine Count
457259 bp
Guanine Count
912528 bp
Cytosine Count
912518 bp
Genome Length
2735295 bp
Protein-coding Genes
2745 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endonuclease v | HLAC_RS02970 | Not Available | - | 618104 - 618997 | 31156.5 |
| rhomboid family intramembrane serine protease | HLAC_RS02975 | Not Available | - | 618998 - 619963 | 33371.3 |
| type i 3-dehydroquinate dehydratase | HLAC_RS02980 | Not Available | - | 620507 - 621211 | 24424.2 |
| transcription initiation factor iib | HLAC_RS02985 | Not Available | - | 621300 - 622274 | 36220.2 |
| cobalamin-binding protein | HLAC_RS02990 | Not Available | + | 622464 - 623240 | 27532.9 |
| duf84 family protein | HLAC_RS02995 | Not Available | + | 623261 - 623854 | 19734.9 |
| hypothetical protein | HLAC_RS03000 | Not Available | + | 624031 - 624285 | 8934.38 |
| winged helix-turn-helix transcriptional regulator | HLAC_RS03005 | Not Available | - | 624319 - 624945 | 22420.9 |
| spfh domain-containing protein | HLAC_RS03010 | Not Available | - | 625058 - 626200 | 42274.9 |
| protein sorting system archaetidylserine synthase | HLAC_RS03015 | Not Available | + | 626347 - 627132 | 26537.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.