Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae ATCC 43184
Accession NumberAAXE00000000.2
Gene Summary
Adenine Count
1214164 bp
Thymine Count
1209920 bp
Guanine Count
994085 bp
Cytosine Count
1013708 bp
Genome Length
4431877 bp
Protein-coding Genes
4384 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PARMER_00274 | Not Available | + | 321449 - 322300 | 30685.3 |
| hypothetical protein | PARMER_00276 | Not Available | + | 322340 - 322798 | 16500.2 |
| transporter, sss family | PARMER_00277 | P96169 | - | 322880 - 324433 | 56420.3 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | PARMER_00278 | Q9BTZ2 | - | 324446 - 325237 | 28692.1 |
| mandelate racemase/muconate lactonizing enzyme, n-terminal domain protein | PARMER_00279 | D4GP40 | - | 325243 - 326412 | 43618.2 |
| hypothetical protein | PARMER_00280 | Q9KBI9 | - | 326442 - 327134 | 25571.1 |
| transcriptional regulator, arac family | PARMER_00281 | Q9HTH5 | - | 327271 - 328134 | 33628.7 |
| glycosyl hydrolase family 2, sugar binding domain protein | PARMER_00282 | Not Available | - | 328280 - 331693 | 128583.0 |
| integrase core domain protein | PARMER_00283 | P16940 | - | 332506 - 332973 | 17688.6 |
| hypothetical protein | PARMER_00284 | Not Available | - | 333080 - 333277 | 7444.09 |
Pathways
55 pathways
Proline Metabolism
Proline Metabolism
Chorismate Biosynthesis
Chorismate Biosynthesis
Gluconeogenesis from L-Malic Acid
Gluconeogenesis from L-Malic Acid
NAD Salvage
NAD Salvage
Lipopolysaccharide Biosynthesis
Lipopolysaccharide Biosynthesis
Sulfur Metabolism
Sulfur Metabolism
Sulfur Metabolism (Isethionate)
Sulfur Metabolism (Isethionate)
S-Adenosyl-L-Methionine Biosynthesis
S-Adenosyl-L-Methionine Biosynthesis
