Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | O1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli APEC O1
Accession NumberNC_009838.1
Gene Summary
Adenine Count
65206 bp
Thymine Count
64095 bp
Guanine Count
57184 bp
Cytosine Count
54902 bp
Genome Length
241387 bp
Protein-coding Genes
212421 genes
Non-Coding Genes
28966 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 85866 - 85880 | Not Available |
| Transposase is26 | APECO1_RS27085 | Not Available | + | 87813 - 88517 | 27896.9 |
| Attl | Not Available | Not Available | + | 88556 - 88570 | Not Available |
| hypothetical protein | APECO1_RS30795 | P06615 | - | 88884 - 89153 | 10022.4 |
| hypothetical protein | APECO1_RS32180 | Not Available | - | 89165 - 89356 | 7567.87 |
| hypothetical protein | APECO1_RS29995 | Not Available | - | 89361 - 89699 | 12566.4 |
| tetracycline efflux mfs transporter tet(c) | APECO1_RS27105 | P02981 | - | 89603 - 90793 | 41572.9 |
| tetracycline resistance transcriptional repressor tetr(c) | APECO1_RS27110 | P03039 | + | 90886 - 91545 | 24175.8 |
| Transposase | APECO1_RS27115 | P13694 | - | 91623 - 94595 | 111065.0 |
| Resolvase | APECO1_RS27120 | P04130 | - | 94598 - 95155 | 21221.6 |
Pathways
12514 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Nitrogen Metabolism
Nitrogen Metabolism
Fatty Acid Oxidation
Fatty Acid Oxidation
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biotin Metabolism
Biotin Metabolism
D-Alanine Metabolism
D-Alanine Metabolism
D-Glutamine and D-Glutamate Metabolism
D-Glutamine and D-Glutamate Metabolism
Lipoic Acid Metabolism
Lipoic Acid Metabolism