Francisella tularensis subsp. novicida U112

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Francisellaceae

Genus

Francisella

Description

Francisella tularensis subsp. novicida U112 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This subspecies is classified as an aerobe, indicating that it requires oxygen for growth and metabolism. F. tularensis subsp. novicida U112 has been isolated from various habitats, suggesting a versatile ecological niche that may contribute to its adaptability in different environments. The structure of F. tularensis subsp. novicida U112, characterized by its rod shape and negative Gram reaction, aligns with the general morphological characteristics of the Francisella genus, which is known for its small cell size and unique cellular features. The ability to thrive in multiple habitats may reflect the organism's ecological flexibility, enabling it to persist in diverse settings, potentially including aquatic environments or soil. Understanding the ecological role of F. tularensis subsp. novicida U112 may provide insights into its interactions within microbial communities and its survival strategies in various ecosystems. This adaptability highlights the importance of further research into its environmental resilience and potential roles in biogeochemical cycles, which could enhance our understanding of microbial dynamics in the ecosystems it inhabits.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyFrancisellaceae
GenusFrancisella
SpeciesFrancisella tularensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Francisella tularensis subsp. novicida U112
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Francisella tularensis subsp. novicida U112

Accession NumberNC_008601.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

1790 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaFTN_RS00005Not Available+145 - 162055829.7
dna polymerase iii subunit betaFTN_RS00010Not Available+1657 - 276041663.1
mfs transporterFTN_RS09235Not Available-2791 - 404446853.0
apc family permeaseFTN_RS00020Not Available+4244 - 576756035.8
zinc transporter zntbFTN_RS00025Not Available+5832 - 680337483.6
hypothetical proteinFTN_RS00030Not Available-6816 - 728318706.7
hypothetical proteinFTN_RS00035Not Available-7361 - 767811694.5
dmt family transporterFTN_RS00040Not Available-7768 - 864032202.7
hypothetical proteinFTN_RS00045Not Available+8784 - 89666915.28
terminase small subunitFTN_RS00050Not Available-9372 - 980616828.9

Displaying genes 1 – 10 of 1842 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 88 metabolites