Undibacterium pigrum str. DSM 19792

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Undibacterium

Description

Undibacterium pigrum str. DSM 19792 is a Gram-negative, rod-shaped bacterium that requires oxygen for growth, classifying it as an aerobic organism. This strain does not form spores, which is characteristic of its metabolic adaptations and ecological niche. The lack of sporulation may suggest a reliance on stable environmental conditions for survival, as well as a potential sensitivity to extreme stressors that typically trigger sporulation in other bacterial species. The morphology of Undibacterium pigrum, being rod-shaped, may influence its motility and interaction with its environment, although specific motility traits are not provided. The aerobic nature of this bacterium indicates that it likely occupies niches where oxygen is readily available, such as surface waters or soils with good aeration. Given the traits of Undibacterium pigrum, further research could explore its role in biogeochemical cycles, particularly in oxygen-rich environments where it may contribute to nutrient cycling or organic matter degradation. The specific metabolic pathways and ecological interactions of this strain remain to be elucidated, but its aerobic nature positions it as a potentially important player in microbial communities that thrive in well-oxygenated habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusUndibacterium
SpeciesUndibacterium pigrum
StrainDSM 19792

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Undibacterium pigrum str. DSM 19792


Gene Summary

Adenine Count

1578919 bp

Thymine Count

1581259 bp

Guanine Count

1625272 bp

Cytosine Count

1620275 bp

Genome Length

6407125 bp

Protein-coding Genes

5713 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phenylacetate-coa ligaseDFR42_10111Not Available+7679 - 901949413.2
hypothetical proteinDFR42_10112Not Available+9057 - 1025941747.3
phenylacetic acid degradation proteinDFR42_10113Not Available+10275 - 1087420989.4
oxepin-coa hydrolase/3-oxo-5,6-dehydrosuberyl-coa semialdehyde dehydrogenaseDFR42_10114Not Available+10924 - 1296972623.4
gaf domain-containing proteinDFR42_10115Not Available+13213 - 16047104240.0
kup system potassium uptake proteinDFR42_10116Not Available+16239 - 1811668334.3
Trna-argNot AvailableNot Available+18174 - 18247Not Available
Trna-argNot AvailableNot Available+18438 - 18511Not Available
thioredoxinDFR42_10119Not Available-18625 - 1902315111.9
trna threonylcarbamoyladenosine biosynthesis protein tsabDFR42_10120Not Available+19170 - 1987724773.0

Displaying genes 21 – 30 of 5799 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites