Pontibacter korlensis str. X14-1T

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter korlensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter korlensis str. X14-1T

Accession NumberNZ_CP009621.1

Gene Summary

Adenine Count

1437154 bp

Thymine Count

1439185 bp

Guanine Count

1292203 bp

Cytosine Count

1293995 bp

Genome Length

5462537 bp

Protein-coding Genes

4647 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
twin-arginine translocase tata/tate family subunitPKOR_RS03915Q3APS6+958598 - 9588167946.85
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataPKOR_RS03920B4S4W1+958813 - 96024952198.0
lytic transglycosylase domain-containing proteinPKOR_RS03925P0AEZ8+960258 - 96178157541.9
nadp-dependent malic enzymePKOR_RS03930Q9ZFV8+962037 - 96431083276.8
holliday junction branch migration protein ruvaPKOR_RS03935Q11Z44+964311 - 96490121331.0
cell surface protein spraPKOR_RS03940Not Available+964918 - 972096272686.0
glycine cleavage system protein gcvhPKOR_RS03945A0LXS6+972156 - 97253614030.2
vanz family proteinPKOR_RS03950Not Available+972562 - 97293914389.1
m28 family metallopeptidasePKOR_RS03955P25152+973000 - 97428948227.9
yicc/yloc family endoribonucleasePKOR_RS03960O34441-974363 - 97524433787.3

Displaying genes 791 – 800 of 4709 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

226 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000122echinenoneC40H54OChemical structure of echinenoneNot available
Average550.871Da
Monoisotopic550.417466359Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 226 metabolites