Enterobacter sp. 638

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Enterobacter

Description

Enterobacter sp. 638 was isolated in association with poplar, Populus trichocarpa x deltoids, and represents a commonly found endophytic bacterium associated with this tree. Endophytes are bacteria that live within the tissue of a plant without substantively harming it. They can help promote plant growth in several ways, including helping the host overcome toxic effects of environmental pollution. Some Enterobacteriales can affect nodule formation by legumes, fix nitrogen and produce plant hormones. The family Enterobacteriacae includes free-living, commensal and pathogenic bacteria associated with host species ranging from plants to humans (adapted from http://genome.jgi-psf.org/finished_microbes/ent_6/ent_6.home.html). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEnterobacter
SpeciesEnterobacter sp. 638
Strain638

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Enterobacter sp. 638

NC_009425.1

Gene Summary

Adenine Count

39268 bp

Thymine Count

38707 bp

Guanine Count

40657 bp

Cytosine Count

39117 bp

Genome Length

157749 bp

Protein-coding Genes

153 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type ii toxin-antitoxin system rele/pare family toxinENT638_RS21545Not Available-25475 - 2577111240.4
type ii toxin-antitoxin system pard family antitoxinENT638_RS21550Not Available-25758 - 260189836.72
hypothetical proteinENT638_RS21560Not Available+26333 - 265759121.78
hypothetical proteinENT638_RS21565Not Available+26572 - 2781645910.6
hypothetical proteinENT638_RS21570Not Available+27821 - 280157576.65
hypothetical proteinENT638_RS21580Not Available+28765 - 2910012799.6
arac family transcriptional regulatorENT638_RS21585Not Available-29162 - 3007033034.9
nadh:flavin oxidoreductase/nadh oxidaseENT638_RS21590Not Available+30258 - 3135240055.3
aldo/keto reductaseENT638_RS21595Not Available+31633 - 3261635842.9
sdr family oxidoreductaseENT638_RS21600Not Available+32658 - 3338625938.4

Displaying genes 21 – 30 of 153 in total

Metabolites

1820 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1820 metabolites