Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Transposase | DSHI_RS00495 | Not Available | - | 96999 - 98891 | 70088.2 |
| Putative ci protein | DSHI_RS00500 | Not Available | + | 99062 - 99538 | 17529.8 |
| Dna polymerase iii alpha | DSHI_RS00505 | Not Available | + | 99840 - 102824 | 109649.0 |
| Serine acetyltransferase | DSHI_RS10995 | Not Available | - | 2290509 - 2291318 | 28556.4 |
| Ribonuclease iii | DSHI_RS11005 | Not Available | - | 2291686 - 2292393 | 24573.9 |
| Tail protein | DSHI_RS11010 | Not Available | - | 2292386 - 2296303 | 141685.0 |
| Phage cell wall peptidase | DSHI_RS11015 | Not Available | - | 2296307 - 2296747 | 15928.0 |
| Minor tail protein | DSHI_RS11020 | Not Available | - | 2296744 - 2297634 | 32620.4 |
| Tail protein | DSHI_RS11025 | Not Available | - | 2297631 - 2298263 | 23411.4 |
| Putative tail tape measure protein | DSHI_RS11030 | Not Available | - | 2298277 - 2298945 | 23067.4 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
