Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493
Accession NumberNC_009952.1
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Carboxy-terminal protease for penicillin-binding protein 3 | DSHI_RS00445 | Not Available | + | 89783 - 91120 | 47854.5 |
| Nude nudix hydrolase | DSHI_RS00450 | Not Available | + | 91122 - 91604 | 18358.7 |
| hypothetical protein | DSHI_RS00455 | Not Available | - | 91896 - 92264 | 13360.9 |
| Mu-like prophage i protein | DSHI_RS21205 | Not Available | - | 92411 - 93343 | 33325.5 |
| Mu-like prophage major head subunit gpt | DSHI_RS00465 | Not Available | - | 93348 - 94247 | 33834.0 |
| helix-turn-helix domain-containing protein | DSHI_RS00470 | Not Available | - | 94244 - 94684 | 16189.7 |
| Gp02 | DSHI_RS00475 | Not Available | - | 95154 - 95564 | 15052.5 |
| hypothetical protein | DSHI_RS00480 | Not Available | - | 95564 - 95848 | 10446.5 |
| hypothetical protein | DSHI_RS00485 | Not Available | - | 95841 - 96140 | 11140.4 |
| Dna transposition protein | DSHI_RS00490 | Not Available | - | 96161 - 96931 | 27920.8 |
Pathways
23 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling